Publications
DeKoster GT, Delaney KJ, Hall KB. A Compare-and-Contrast NMR Dynamics Study of Two Related RRMs: U1A and SNF. Biophys J. 2014 107(1):208-19. PubMed PMID: 24988355.
Williams SG, Hall KB. Binding Affinity and Cooperativity Control U2B″/snRNA/U2A’ RNP Formation. Biochemistry. 2014 53(23):3727-37. PMID:24866816
Williams SG, Hall KB. Linkage and Allostery in snRNP Protein/RNA Complexes. Biochemistry. 2014. 53(22):3529-39. PMID:24849693
Delaney KJ, Williams SG, Lawler M, Hall KB. Climbing the vertebrate branch of U1A/U2B″ protein evolution. RNA. 2014. 20(7):1035-45. PMID:24840944
Hall KB. Molecular biology: Protein binding cannot subdue a lively RNA. Nature. 2014. 506(7488):303-4. PMID:24522527
Hall KB. RNA does the folding dance of twist, turn, stack. Proc Natl Acad Sci U S A. 2013. 110(42):16706-7.
Williams SG, Harms MJ, Hall KB. Resurrection of an Urbilaterian U1A/U2B″/SNF protein. J Mol Biol. 2013. 425(20):3846-62.
Rau M, Stump WT, Hall KB. Intrinsic flexibility of snRNA hairpin loops facilitates protein binding. RNA. 2012. 18(11):1984-95.
Hall KB. Spectroscopic probes of RNA structure and dynamics. Methods Mol Biol. 2012. 875:67-84.
Nayak RK, Peersen OB, Hall KB, Van Orden A. Millisecond time-scale folding and unfolding of DNA hairpins using rapid-mixing stopped-flow kinetics. J Am Chem Soc. 2012. 134(5):2453-6.
Williams SG, Hall KB. Human U2B″ protein binding to snRNA stemloops. Biophys Chem. 2011 Nov;159(1):82-9.
Williams SG, Hall KB. Coevolution of Drosophila snf protein and its snRNA targets. Biochemistry. 2010 Jun 8;49(22):4571-82.
Liu F, Maynard C, Scott G, Melnykov A, Hall KB, Gruebele M. A natural missing link between activated and downhill protein folding scenarios. Phys Chem Chem Phys. 2010 Apr 14;12(14):3542-9.
Maynard CM, Hall KB. Interactions between PTB RRMs induce slow motions and increase RNA binding affinity. J Mol Biol. 2010 Mar 19;397(1):260-77.
Melnykov AV, Hall KB. Revival of high-order fluorescence correlation analysis: generalized theory and biochemical applications. J Phys Chem B. 2009 Nov 26;113(47):15629-38.
Clerte C, Hall KB. The domains of polypyrimidine tract binding protein have distinct RNA structural preferences. Biochemistry. 2009 Mar 17;48(10):2063-74.
Hall KB. 2-aminopurine as a probe of RNA conformational transitions. Methods Enzymol. 2009;469:269-85.
Hall KB. RNA in motion. Curr Opin Chem Biol. 2008 Dec;12(6):612-8.
Coppins RL, Hall KB, Groisman EA. The intricate world of riboswitches. Curr Opin Microbiol. 2007 Apr;10(2):176-81.
Clerte C, Hall KB. Characterization of multimeric complexes formed by the human PTB1 protein on RNA. RNA. 2006 Mar;12(3):457-75.
Showalter SA, Baker NA, Tang C, Hall KB. Iron responsive element RNA flexibility described by NMR and isotropic reorientational eigenmode dynamics. J Biomol NMR. 2005 Jul;32(3):179-93.
Showalter SA, Hall KB. Correlated motions in the U1 snRNA stem/loop 2:U1A RBD1 complex. Biophys J. 2005 Sep;89(3):2046-58.
Showalter SA, Hall KB. Isotropic reorientational eigenmode dynamics complements NMR relaxation measurements for RNA. Methods Enzymol. 2005;394:465-80.
Clerte C, Hall KB. Global and local dynamics of the U1A polyadenylation inhibition element (PIE) RNA and PIE RNA-U1A complexes. Biochemistry. 2004 Oct 26;43(42):13404-15.
Jean JM, Hall KB. Stacking-unstacking dynamics of oligodeoxynucleotide trimers. Biochemistry. 2004 Aug 10;43(31):10277-84.
Hall KB, Williams DJ. Dynamics of the IRE RNA hairpin loop probed by 2-aminopurine fluorescence and stochastic dynamics simulations. RNA. 2004 Jan;10(1):34-47.
Showalter SA, Hall KB. Altering the RNA-binding mode of the U1A RBD1 protein. J Mol Biol. 2004 Jan 9;335(2):465-80.
Jean JM, Hall KB. 2-Aminopurine electronic structure and fluorescence properties in DNA. Biochemistry. 2002 Nov 5;41(44):13152-61.
Showalter SA, Hall KB. A functional role for correlated motion in the N-terminal RNA-binding domain of human U1A protein. J Mol Biol. 2002 Sep 20;322(3):533-42.
Hall KB. RNA-protein interactions. Curr Opin Struct Biol. 2002 Jun;12(3):283-8.
Williams DJ, Boots JL, Hall KB. Thermodynamics of 2′-ribose substitutions in UUCG tetraloops. RNA. 2001 Jan;7(1):44-53.
Jean JM, Hall KB. 2-Aminopurine fluorescence quenching and lifetimes: role of base stacking. Proc Natl Acad Sci U S A. 2001 Jan 2;98(1):37-41.
Williams DJ, Hall KB. Monte Carlo applications to thermal and chemical denaturation experiments of nucleic acids and proteins. Methods Enzymol. 2000;321:330-52.
Clerte C, Hall KB. Spatial orientation and dynamics of the U1A proteins in the U1A-UTR complex. Biochemistry. 2000 Jun 20;39(24):7320-9.
Williams DJ, Hall KB. Experimental and computational studies of the G[UUCG]C RNA tetraloop. J Mol Biol. 2000 Apr 14;297(5):1045-61.
Williams DJ, Hall KB. Experimental and theoretical studies of the effects of deoxyribose substitutions on the stability of the UUCG tetraloop. J Mol Biol. 2000 Mar 17;297(1):251-65.